Journal Description
Diversity
Diversity
is a peer-reviewed, open access journal on the science of biodiversity from molecules, genes, populations, and species, to ecosystems and is published monthly online by MDPI.
- Open Access— free for readers, with article processing charges (APC) paid by authors or their institutions.
- High Visibility: indexed within Scopus, SCIE (Web of Science), PubAg, GEOBASE, CAPlus / SciFinder, and other databases.
- Journal Rank: JCR - Q2 (Biodiversity Conservation) / CiteScore - Q2 (Agricultural and Biological Sciences (miscellaneous))
- Rapid Publication: manuscripts are peer-reviewed and a first decision is provided to authors approximately 17.8 days after submission; acceptance to publication is undertaken in 2.8 days (median values for papers published in this journal in the second half of 2023).
- Recognition of Reviewers: reviewers who provide timely, thorough peer-review reports receive vouchers entitling them to a discount on the APC of their next publication in any MDPI journal, in appreciation of the work done.
Impact Factor:
2.4 (2022);
5-Year Impact Factor:
2.5 (2022)
Latest Articles
BBS Gene Expression and Its Diversity in the Genus Dendrobium
Diversity 2024, 16(6), 337; https://doi.org/10.3390/d16060337 - 7 Jun 2024
Abstract
Dendrobium officinale Kimura & Migo in the genus Dendrobium of Orchidaceae is an important medicinal plant that produces various bibenzyl and phenanthrene derivatives. In some orchids, these derivatives have been reported to increase with fungal infection. Bibenzyl biosynthesis is regulated by bibenzyl
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Dendrobium officinale Kimura & Migo in the genus Dendrobium of Orchidaceae is an important medicinal plant that produces various bibenzyl and phenanthrene derivatives. In some orchids, these derivatives have been reported to increase with fungal infection. Bibenzyl biosynthesis is regulated by bibenzyl synthase (BBS). Although six genes of the BBS family have been registered from D. officinale, their gene regulation mechanisms are unclear. The infection of Dendrobium with mycorrhizal fungi also reportedly increases the expression of genes involved in biosynthesis; however, the effect of mycorrhizal fungi on bibenzyl production is unknown. The present study examined the effects of three mycorrhizal fungi isolated from D. officinale on BBS gene expression and bibenzyl production over time. One of the Tulasnellaceae operational taxonomic units induced BBS gene expression and increased two representative bibenzyls, gigantol and dendrophenol, at specific time points. Furthermore, 19 BBS sequences were cloned from 12 Dendrobium species, and a phylogenetic analysis was performed. The results indicated that repeated BBS gene duplication occurred during the evolution of the genus, and further duplication occurred after speciation. These results suggest that it is possible to optimize metabolite production by selecting suitable symbiotic fungi.
Full article
(This article belongs to the Special Issue Distribution and Diversity of Orchids—2nd Edition)
Open AccessArticle
Genetic Population Structure of Lane Snapper Lutjanus synagris (Linnaeus, 1758) in Western Atlantic: Implications for Conservation
by
Mayra Núñez-Vallecillo, Iván Vera-Escalona, Antonella Rivera, Konrad Górski and Antonio Brante
Diversity 2024, 16(6), 336; https://doi.org/10.3390/d16060336 - 7 Jun 2024
Abstract
Genetic structure and connectivity information can be used to identify biological corridors and prioritize the conservation of areas that help maintain ecosystem integrity. Some marine fish, especially those of commercial interest, have been proposed as suitable indicators to identify potential marine biological corridors
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Genetic structure and connectivity information can be used to identify biological corridors and prioritize the conservation of areas that help maintain ecosystem integrity. Some marine fish, especially those of commercial interest, have been proposed as suitable indicators to identify potential marine biological corridors due to their high mobility among habitats and socioeconomic importance. In this study, we assessed the genetic structure of lane snapper populations in the Honduran Caribbean to evaluate connectivity and identify potential environmental barriers. Furthermore, we evaluated the genetic characteristics of the lane snapper on a larger spatial scale, including populations across the rest of its distribution range in the western Atlantic, using mtDNA and nuDNA markers. Our results demonstrate a significant genetic diversity of lane snappers in the Honduran Caribbean. Furthermore, despite their high dispersal potential, we observed genetic structuring in lane snapper populations on a larger spatial scale, resulting in the formation of two distinct groups throughout their distribution range: group 1 from Florida, the Gulf of Mexico, Honduras, and Colombia and group 2 from Puerto Rico and Brazil. This genetic differentiation can be attributed to oceanographic barriers such as river plumes and marine currents. These findings have the potential to significantly impact marine conservation and management efforts in the region, both at local and regional scales. It is anticipated that they will not only inform but also elicit a response, driving further action towards effective conservation measures. At a local scale, we recommend that conservation efforts focus on protecting critical habitats. At a regional scale, lane snappers should be included in the management plans of existing marine protected areas necessary to ensure the long-term sustainability of the species and the marine ecosystems in which it resides.
Full article
(This article belongs to the Special Issue Diversity in 2024)
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Open AccessArticle
Reptile Biodiversity and Vulnerability in Bolivia’s Beni Department: Informing Conservation Priorities in a Neglected Frontier
by
Cord B. Eversole, Randy L. Powell, Luis R. Rivas and Dennis E. Lizarro
Diversity 2024, 16(6), 335; https://doi.org/10.3390/d16060335 - 7 Jun 2024
Abstract
The Department of Beni, in the country of Bolivia, is thought to host a significant level of biodiversity as a result of its tropical, moist, and diverse climate and landscape. However, the biodiversity of Beni is also considered poorly known and understudied due
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The Department of Beni, in the country of Bolivia, is thought to host a significant level of biodiversity as a result of its tropical, moist, and diverse climate and landscape. However, the biodiversity of Beni is also considered poorly known and understudied due to its inaccessible landscapes, socio-economic challenges, and an overall lack of biodiversity infrastructure. This emphasizes the need for comprehensive species inventories and the development of effective conservation policies and strategies. We conducted an assessment of biodiversity, environmental vulnerability, and conservation status of reptiles documented in Beni. We identified 169 reptile species, spanning three orders and twenty-five families that have been officially documented in Beni. Utilizing the Environmental Vulnerability Score (EVS), we classified these species into high (17.8%), medium (68.1%), and low (14.2%) vulnerability categories, while IUCN categorization revealed 1.8% of reptile species in Beni are classified as vulnerable and 0.6% as near threatened. We found significant differences in ecological drivers of vulnerability among species within all categories (high, medium, low), with habitat specificity and human persecution being significantly higher for high and medium-vulnerability species. Our results demonstrate the intricate vulnerabilities of Beni’s reptiles, highlighting the need for comprehensive, species-specific conservation strategies and planning. Most importantly, our results offer a consolidated framework of information on reptile biodiversity and conservation for researchers, conservationists, and policymakers to use and build upon in the future that will facilitate the development of biodiversity infrastructure not only in the Department of Beni but throughout Bolivia and the Neotropics
Full article
(This article belongs to the Special Issue Biodiversity Conservation Planning and Assessment)
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Open AccessArticle
Tardigrades of North America: Additions to Montana’s Biodiversity Including a New Species, Platicrista loloensis nov. sp. (Parachela, Hypsibioidea, Itaquasconinae)
by
Chelsea N. Scheirer, William R. Miller and Jeffrey D. Miller
Diversity 2024, 16(6), 334; https://doi.org/10.3390/d16060334 - 6 Jun 2024
Abstract
A total of 205 tardigrades representing two orders, five families, nine genera and ten species were extracted from a moss sample (104 tardigrades) and a lichen sample (101 tardigrades) collected near Missoula, Montana, in 2016. Three of the species are new to Montana
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A total of 205 tardigrades representing two orders, five families, nine genera and ten species were extracted from a moss sample (104 tardigrades) and a lichen sample (101 tardigrades) collected near Missoula, Montana, in 2016. Three of the species are new to Montana and one is new to science, Platicrista loloensis nov. sp., which is distinguished by its smooth cuticle, the presence of internal cuticular bars at the base of the claws of legs II and III and a median cuticular bar between the claws of leg IV.
Full article
(This article belongs to the Special Issue Investigating the Biodiversity of the Tardigrada)
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Open AccessArticle
What Factors Determine the Natural Fruit Set of Cephalanthera longifolia and Cephalanthera rubra?
by
Laurynas Taura and Zigmantas Gudžinskas
Diversity 2024, 16(6), 333; https://doi.org/10.3390/d16060333 - 6 Jun 2024
Abstract
The reproduction of rare and endangered plant species is one of the most important factors determining the stability and survival of their populations, and knowledge of the barriers to successful reproduction is essential for species conservation. Habitat loss and slow reproduction due to
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The reproduction of rare and endangered plant species is one of the most important factors determining the stability and survival of their populations, and knowledge of the barriers to successful reproduction is essential for species conservation. Habitat loss and slow reproduction due to low fruit set are usually considered the main threats to Cephalanthera longifolia and C. rubra (Orchidaceae). The aim of this study was to analyse the natural fruit set of these species during three consecutive years in Lithuania in the northern part of the temperate zone of Europe. Six populations of C. longifolia and three populations of C. rubra were studied each year from 2021 to 2023. During the study period, 49.3% to 54.4% of C. longifolia and 40.0% to 54.3% of C. rubra individuals produced no fruit. Over the three-year period, fruit set in individual populations of C. longifolia ranged from 5.2% to 19.5%, whereas fruit set in populations of C. rubra ranged from 4.1% to 18.8%. Significant weak or moderate correlations were found between plant height, inflorescence length and the number of flowers in the inflorescence and fruit set of both species. Flower position in the inflorescence had a significant effect on fruit set in both species, and the fruit set rate of lower flowers was higher than that of upper flowers. Significant but weak correlations were found between the fruit set and most of the environmental factors analysed. The results of this study suggest that the fruit set of C. longifolia and C. rubra is dependent on insect pollination of the flowers, which in turn is affected by habitat conditions.
Full article
(This article belongs to the Section Biodiversity Conservation)
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Open AccessArticle
Trade-Off between Song Complexity and Colorfulness in Parid Birds
by
Dieter Thomas Tietze and Antje Hahn
Diversity 2024, 16(6), 332; https://doi.org/10.3390/d16060332 - 5 Jun 2024
Abstract
Passerines are the most successfully diversified bird order (around 60% of all avian species). They have developed complicated songs to defend their territories and to attract females for mating that can evolve quickly due to cultural transmission. Complex singing as well as plumage
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Passerines are the most successfully diversified bird order (around 60% of all avian species). They have developed complicated songs to defend their territories and to attract females for mating that can evolve quickly due to cultural transmission. Complex singing as well as plumage coloration of male birds are honest signals for potential partners and provide information about the males’ quality. To function as honest signals, both traits must be costly for the males. Of course, not all passerine species are equally clever or beautiful. Even within a single family of 50 to 70 species, relevant traits may vary considerably. Tits and chickadees (Paridae) comprise species of similar size, varying a lot in coloration and plumage pattern. The territorial songs are relatively short and simple. We investigated the relationship between song complexity and plumage coloration, taking phylogenetic relationships into account. We studied 55 out of the 64 species with 1084 song recordings retrieved from an online database. In the best model, besides colorfulness, body size had a negative impact on song complexity. Large colorful species were found to sing less complex songs. This result supports the hypothesis of a trade-off between costly traits and their likely intense signal function. This study contributes to a better understanding of how sexual selection influences the diversification of traits. In addition, we found that despite the relatively uniform size, the general negative correlation between body size and song frequency can be recovered. Some song traits are further influenced by distribution and thus by interspecific differences in climate niche.
Full article
(This article belongs to the Special Issue Selected Papers from International Eurasian Ornithology Congress (IEOC 2023))
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Open AccessArticle
Spatial, Temporal, and Interspecific Differences in Composition of Stable Isotopes in Fishes in Maryland Coastal Bays
by
Chelsea Richardson, Paulinus Chigbu and Ali Ishaque
Diversity 2024, 16(6), 331; https://doi.org/10.3390/d16060331 - 4 Jun 2024
Abstract
Carbon (δ13C) and nitrogen (δ15N) isotopes were used to evaluate spatial, temporal, and interspecific differences in trophic relationships of four fish species (Paralichthys dentatus, Anchoa mitchilli, Leiostomus xanthurus, and Bairdiella chrysoura) in Maryland’s coastal
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Carbon (δ13C) and nitrogen (δ15N) isotopes were used to evaluate spatial, temporal, and interspecific differences in trophic relationships of four fish species (Paralichthys dentatus, Anchoa mitchilli, Leiostomus xanthurus, and Bairdiella chrysoura) in Maryland’s coastal bays. The δ13C values for all species were more enriched in 2017 than in 2018, a year of higher-than-average rainfall that likely caused higher amounts of terrestrial carbon to enter the estuary. There were significant differences among species in the δ13C values, with L. xanthurus being the least depleted (−17.2‰ in 2017; −18.8‰ in 2018). Spatially, the δ13C values of the species, particularly P. dentatus and B. chrysoura, were more depleted in the northern bays, which have a higher nutrient content and receive more freshwater inflow directly from tributaries, than the southern bays. The observed δ13C values (−19.5 ± 0.2‰ to –17.2 ± 0.3‰), however, indicate that marine phytoplankton was the primary carbon source of the fishes. Overall, A. mitchilli was the most enriched in δ15N (13.0‰), and L. xanthurus was the most depleted (10.2‰). δ15N was more enriched in fish from the more human-impacted northern bays than in fish from the southern bays, though this might also have stemmed from the differences in the diet composition of the species in the northern and southern bays. A. mitchilli had the highest trophic level, while L. xanthurus and P. dentatus had the lowest trophic levels. Niche breadth was widest in L. xanthurus compared to the other fish species, suggesting a higher variability in diets among L. xanthurus individuals, leading to specialized diets. There was a high niche overlap between B. chrysoura, A. mitchilli, and L. xanthurus, which indicates they fed on similar prey resources.
Full article
(This article belongs to the Special Issue Marine Ecosystem Functioning and Food Webs under Climate Change)
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Open AccessArticle
The Effects of Sampling-Site Intervals on Fish Species Richness in Wadeable Rivers: A Case Study from Taizi River Basin, Northeastern China
by
Mingqiao Yu, Zhao Li, Qian Zhao and Sen Ding
Diversity 2024, 16(6), 330; https://doi.org/10.3390/d16060330 - 4 Jun 2024
Abstract
Fish play an important role in river ecosystems, and the conservation of their diversity is a common goal worldwide. It is still unclear how fish monitoring programs should be developed in order to rationalize the monitoring of fish diversity in rivers. To help
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Fish play an important role in river ecosystems, and the conservation of their diversity is a common goal worldwide. It is still unclear how fish monitoring programs should be developed in order to rationalize the monitoring of fish diversity in rivers. To help address this issue, we conducted a comparative study of fish species richness obtained through three site-interval monitoring programs (SS1: 3 km interval scheme; SS2: 6 km interval scheme; SS3: 9 km interval scheme) in wadeable rivers in northeastern China. Here, a total of 18 fish species and 4 rare species were collected from 3 rivers. The cumulative species-richness curves showed that SS1 had the highest species richness in a single river and in the whole region, and the species richness gradually decreased with increasing site intervals. The results of the cumulative percentage of species richness indicated that SS1 and SS2 could achieve a level of 80% of potential species richness, while only SS1 could achieve a level of 90% of potential species richness in the Lanhe River (where no rare species were present). However, the results of cumulative species richness per unit of effort indicated that SS2 and SS3 had higher input-output benefits. These results suggested that rare species were more susceptible to monitoring programs and that SS2 was more advantageous in terms of obtaining species richness and cost-effectiveness. This study provides a reliable reference for river fish-monitoring program development.
Full article
(This article belongs to the Special Issue Monitoring and Conservation of Aquatic Organism in the Yangtze River Basin)
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Open AccessArticle
Macrobenthic Assemblages and the Influence of Microhabitat in a High-Mountain Lake (Northwest Italy)
by
Alice Gabetti, Alessandra Maganza, Camilla Mossotto, Barbara Rizzioli, Giuseppe Esposito, Marco Bertoli, Elisabetta Pizzul, Elena Bozzetta, Marino Prearo and Paolo Pastorino
Diversity 2024, 16(6), 329; https://doi.org/10.3390/d16060329 - 3 Jun 2024
Abstract
High-mountain lakes are freshwater ecosystems situated above the tree line which are known for their remote locations and limited accessibility. These ecosystems host simplified biotic communities primarily concentrated in the littoral zone and dominated by benthic macroinvertebrates that serve as bioindicators of environmental
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High-mountain lakes are freshwater ecosystems situated above the tree line which are known for their remote locations and limited accessibility. These ecosystems host simplified biotic communities primarily concentrated in the littoral zone and dominated by benthic macroinvertebrates that serve as bioindicators of environmental pressures. A two-year monitoring investigation was performed in July 2022 and July 2023 at Nero Lake (Cesana Torinese, Northwest Italy). Five sites along the lakeshore were selected for sampling physicochemical water parameters and macrobenthos. All collected data were analysed to compare trends across years and within specific sites. The results revealed that Nero Lake exhibited consistent macrobenthic communities across the two years studied, but significant differences were observed in its microhabitats. This suggests that substrate type and physicochemical water parameters strongly influence community composition. Chironomidae larvae and Mollusca were the dominant species, showing distinct associations with different substrates and environmental factors from one year to another. These findings contribute to our understanding of the intricate relationships between benthic macroinvertebrates and their environments, highlighting the necessity of detailed, small-scale assessments to comprehend ecosystem dynamics and develop effective conservation strategies.
Full article
(This article belongs to the Special Issue High-Mountain Lakes, Indicators of Global Change: Ecological Characterization and Environmental Pressures-2nd Edition)
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Open AccessArticle
Changes in Population Densities and Species Richness of Pollinators in the Carpathian Basin during the Last 50 Years (Hymenoptera, Diptera, Lepidoptera)
by
Attila Haris, Zsolt Józan, Ladislav Roller, Peter Šima and Sándor Tóth
Diversity 2024, 16(6), 328; https://doi.org/10.3390/d16060328 - 3 Jun 2024
Abstract
Temporal changes in population densities and species richness of three main pollinator groups—moths and butterflies (Lepidoptera); bees, wasps and sawflies (Hymenoptera); and hoverflies, horseflies, tachinids and bee flies (Diptera)—were investigated in the Carpathian Basin. Maintaining pollinator diversity is a crucial factor for preserving
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Temporal changes in population densities and species richness of three main pollinator groups—moths and butterflies (Lepidoptera); bees, wasps and sawflies (Hymenoptera); and hoverflies, horseflies, tachinids and bee flies (Diptera)—were investigated in the Carpathian Basin. Maintaining pollinator diversity is a crucial factor for preserving our biodiversity and ecosystems; furthermore, several pollinator species have a strong economic role in maintaining crop and fruit cultures. Our conclusions are based on our three and four decades of faunistic surveys in various regions of the Carpathian Basin. Analyzing and comparing our data with the historical data of the last 50 years, we concluded that densities of some pollinators declined during the past decade and a half (Symphyta, hoverflies), although populations of several species of Mediterranean origin grew (Aculeata) and new species even migrated from the warmer regions. In numerous cases, this decrease was dramatic: more than 90% decline of certain butterfly species were detected. On the other hand, the composition of pollinator fauna significantly changed due to the disappearance of some mountainous or mesophile species. The main reason for the decrease in pollinator communities is due partly to climatic change and partly to anthropogenic factors. Different groups of pollinators react differently: some groups like Syrphidae, Tachinidae, most of the butterfly families and bumblebees suffered a strong decline in the last two decades; other warm-loving groups like most of Aculeata and horseflies and bee flies showed a significant increase in population densities. Our conclusion: in our region, the pollinator crisis is present but moderate; however, there is a clear sign of the gradual transition of our pollinator fauna towards the Mediterranean type.
Full article
(This article belongs to the Special Issue Emerging Effects of Pollinator Loss on Biodiversity)
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Soil Studies for Fungal Diversity to Enable the Conservation Translocation of Green-Winged Orchid
by
Millie Brigitte Newmarch, Mélusine Velde, Manoj Menon and Viswambharan Sarasan
Diversity 2024, 16(6), 327; https://doi.org/10.3390/d16060327 - 31 May 2024
Abstract
Conservation Translocation (CT), which includes reintroduction, reinforcement and introduction, is gaining momentum, responding to serious population decline in many orchids. Orchid conservation underpinned by a greater emphasis on understanding biotic and abiotic factors of habitats is critical for successful recovery and restoration programmes.
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Conservation Translocation (CT), which includes reintroduction, reinforcement and introduction, is gaining momentum, responding to serious population decline in many orchids. Orchid conservation underpinned by a greater emphasis on understanding biotic and abiotic factors of habitats is critical for successful recovery and restoration programmes. Anacamptis morio, commonly known as green-winged orchid (GWO), is a terrestrial orchid found throughout Europe, but populations in England rapidly declined in its native range in the last several decades. The current study explored the relationship between soil abiotic characteristics and the community composition of key fungal groups. Wild sites in Essex and Cumbria in England, where successful colonies are currently present, were compared to potential sites for CT in Cumbria. The Cumbrian sites managed by cattle grazing include the wild site and three potential CT sites, with two of them hosting no GWO plants. The Essex site, fOxley Meadow, where no cattle is used for grassland management, hosts the largest population of GWO in England. The aim of this study was to understand whether the community composition of fungi and soil characteristics of the potential CT sites in Cumbria are nearly compatible with that of Oxley Meadow. Oxley Meadow, with around 65,000 plants, stands out as a unique habitat compared to all Cumbria sites, as it showed low organic content. Nitrate and phosphate content were smaller for Oxley Meadow compared to other Cumbrian sites. The proportion of Basidiomycota fungi was greater in Oxley Meadow compared to all Cumbrian sites where Ascomycota dominated. The abundant fungal group found in Oxley Meadow was Agaricales. From Agariclaes, Hygrophoraceae or waxcaps fungi are considered an indicator group of fungi and were the most abundant group in Oxley Meadow. They have a negative correlation with targeted key fungal groups and abiotic parameters. More in-depth assessments using additional primers are essential to better understand the fungal diversity and how this diversity translates to the resilience of orchid habitats. This preliminary study points to future studies to assess whether sites are near-compatible to the wild site where large colonies are present using additional primers collected over different time scales.
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(This article belongs to the Special Issue Diversity in 2024)
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Open AccessBrief Report
Mapping Breeding Birds in a Karstic Sinkhole with a Comparison between Different Sampling Methods
by
Corrado Battisti, Pierangelo Crucitti, Giuseppe Dodaro, Marco Giardini and Francesca Marini
Diversity 2024, 16(6), 326; https://doi.org/10.3390/d16060326 - 30 May 2024
Abstract
Karstic sinkholes are peculiar structures hosting specific biological communities. Birds are still little studied in this regard. This note reports, for the first time, original data relating to the density of breeding species occurring within a sinkhole in central Italy obtained with a
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Karstic sinkholes are peculiar structures hosting specific biological communities. Birds are still little studied in this regard. This note reports, for the first time, original data relating to the density of breeding species occurring within a sinkhole in central Italy obtained with a fine-grained and time-expensive sampling technique (mapping method). The results were compared with data sampled with the point counts method carried out in the same phenological period. We recorded 22 breeding species, all typical of meso-thermophilous forests and ecotonal habitats of hilly central Italy. Among them, two species (Turdus merula and Troglodytes troglodytes), typical of shady, undergrowth habitats, were recorded in the deepest part of the sinkhole (−70 m from the top). No significant differences emerged between the relative frequencies of the species obtained with the two methods, except for Luscinia megarhynchos (overestimated with the mapping method) and Aegithalos caudatus (underestimated). At the community level, the comparison of the two methods revealed similar values in univariate diversity metrics, Whittaker plots did not show a significant difference (ANCOVA test), and ordinary least squares regression between the frequencies showed a highly significant correlation. Therefore, in these peculiar habitats, data obtained from the two methods are comparable: since the point counts method needs lower sampling effort, it appeared to be more effective when compared to the mapping method to study these peculiar habitats.
Full article
(This article belongs to the Special Issue 2024 Feature Papers by Diversity’s Editorial Board Members)
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Open AccessArticle
Contributions to the Taxonomy of the Mugilid Genus Moolgarda Whitley (Teleostei: Mugilidae), with Redescriptions of M. crenilabis, M. seheli and M. tade from the Red Sea
by
Sergey V. Bogorodsky, Philipp Thieme, Hiroshi Senou, Zuheir N. Mahmoud, Tilman J. Alpermann and Jean-Dominique Durand
Diversity 2024, 16(6), 325; https://doi.org/10.3390/d16060325 - 30 May 2024
Abstract
The taxonomy of the family Mugilidae has historically posed challenges, marked by discrepancies between described and valid species, compounded by cryptic diversity and a similar external appearance. Previous studies left four of six lineages unidentified within Crenimugil, including Crenimugil sp. A and
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The taxonomy of the family Mugilidae has historically posed challenges, marked by discrepancies between described and valid species, compounded by cryptic diversity and a similar external appearance. Previous studies left four of six lineages unidentified within Crenimugil, including Crenimugil sp. A and Crenimugil sp. B. The goal of this study is to provide a detailed revision of species assigned to Crenimugil by examining specimens from the Red Sea, which is the type locality of Mugil crenilabis, Mugil seheli and Mugil tade, which were here genetically analyzed. After demonstrating that the genus contains nine monophyletic lineages and Moolgarda pura is a valid nominal species, the mugilid genus Moolgarda is restored. Consequently, Moolgarda has priority over Crenimugil and Valamugil. Additional morphological analyses of specimens from the Red Sea assigned to Moolgarda sp. A and Moolgarda sp. B identified them as representing Moolgarda seheli and Moolgarda crenilabis, respectively. A phylogenetic analysis, including new DNA barcodes, confirmed a wide distribution range of both species in the Indo-West Pacific. The identity of the lineage previously identified as Crenimugil crenilabis remains doubtful, and it is referred to as Moolgarda cf. crenilabis here. A third lineage, previously named Crenimugil buchanani, is re-described as Moolgarda tade, a species originally reported from the Red Sea with a long history of taxonomic confusion. The species is widely distributed in the Indo-West Pacific and distinguished from other congeners by falcate second dorsal and anal fins that are distinctly higher than the first dorsal fin. A detailed description of the Red Sea specimens of M. crenilabis, M. seheli and M. tade is provided, with comments to other unnamed lineages.
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(This article belongs to the Special Issue Fish Diversity in the Red Sea)
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Open AccessArticle
Insect Abundance and Richness Response to Ecological Reclamation on Well Pads 5–12 Years into Succession in a Semi-Arid Natural Gas Field
by
Michael F. Curran, Jasmine Allison, Timothy J. Robinson, Blair L. Robertson, Alexander H. Knudson, Bee M. M. Bott, Steven Bower and Bobby M. Saleh
Diversity 2024, 16(6), 324; https://doi.org/10.3390/d16060324 - 29 May 2024
Abstract
Natural gas extraction is a critical driver of the economy in western North America. Ecological reclamation is important to ensure surface disturbance impacts associated with natural gas development are not permanent and to assist native biota. Previous studies in semi-arid natural gas fields
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Natural gas extraction is a critical driver of the economy in western North America. Ecological reclamation is important to ensure surface disturbance impacts associated with natural gas development are not permanent and to assist native biota. Previous studies in semi-arid natural gas fields within Sublette County, Wyoming, USA have shown insects respond favorably to 1–3-year-old well pads undergoing reclamation compared to older successional reference vegetation communities dominated by Wyoming big sagebrush (Artemisia tridentata spp. Wyomingensis). Here, we examined well pads which were initially seed 5, 8, 10, 11, and 12 years prior to our study. We used a free, image-based software called SamplePointv. 1.60 to quantify vegetation on these well pads and adjacent reference areas from cell phone camera photographs. Insects were collected with a sweep net and identified to the family and morphospecies level. Statistical analyses were conducted to compare both vegetation and insect communities between reclamation sites and their paired reference area. We found little statistical difference between vegetation communities across our study but found significantly more insect abundance on reclaimed well pads than reference areas in 3 of 5 years and significantly higher family and morphospecies richness on reclaimed well pads in 4 of 5 years. A total of 2036 individual insects representing 270 species from 71 families across 11 orders were identified across this study. A total of 1557 individuals (76.5%) were found on reclamation sites, whereas 479 (23.5%) were found in reference areas across the entire study. A total of 233 species (86.3% of total) were found on reclamation sites, whereas 121 species (44.8% of total) were found in reference areas across the entire study. A total of 67 families (94.4% of total) were found on reclamation sites, whereas 45 families (63.4% of total) were found in reference areas across the entire study. All 11 orders found in the study were found on reclamation sites, whereas 9 orders were found in reference areas across the entire study. Our results suggest reclamation of natural gas well pads within an old successional stand of sagebrush continues to support higher levels of insect biodiversity and abundance for at least 12 years. As insects are the most diverse group of animals on Earth and because they provide a wide array of ecosystem services, our findings suggest ecological reclamation plays an important role in returning biodiversity and ecosystem functionality to a semi-arid and old successional sagebrush–steppe ecosystem.
Full article
(This article belongs to the Special Issue Biodiversity in Arid Ecosystems)
Open AccessReview
The Elasmobranch Fossil Record of the Indo-Australian Archipelago since the Miocene: A Literature Review and New Discoveries from Northern Borneo
by
László Kocsis
Diversity 2024, 16(6), 323; https://doi.org/10.3390/d16060323 - 29 May 2024
Abstract
The Indo-Australian Archipelago (IAA) today exhibits the highest marine biodiversity, which has been evolving since the early Miocene. The existence of this high palaeobiodiversity is attested to by the presence of many fossil invertebrates; however, the region’s fossil fish record is sparse and
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The Indo-Australian Archipelago (IAA) today exhibits the highest marine biodiversity, which has been evolving since the early Miocene. The existence of this high palaeobiodiversity is attested to by the presence of many fossil invertebrates; however, the region’s fossil fish record is sparse and understudied, which is also the case for cartilaginous fishes. Elasmobranch fossils are dominantly represented by shark and ray teeth in the geological record and can give a quick overview of the composition of the fauna. The first IAA elasmo fossils, shark teeth were described from Java (Indonesia) at the end of the 19th century, and until today, most of the publications are known from this island. In the early and middle of the 20th century, remarkable fossils were also reported from the islands of Madura (NE Java) and Sulawesi, some with detailed taxonomical descriptions. In addition, only sporadic reports on fossil occurrences exist elsewhere from the IAA, but these lack any detailed taxonomic accounts. In 2019 our research group reported a late Miocene elasmobranch fauna from Brunei (Borneo), which is now the most diverse known shallow water fossil assemblage from the entire IAA. This fauna was described from a single fossiliferous outcrop, called Ambug Hill. However, several new localities have been discovered and studied over the years, as a result the number of fossils increased, and their age range extended. Here we provide an overview of these new sites and their elasmobranch fossils, and describe remains from ten taxa among, of which eight are new to the IAA fossil record (Chiloscyllium sp., cf. Hemitriakis sp., Paragaleus sp., Carcharhinus borneensis, C. limbatus, Lamiopsis sp., Scoliodon sp., Rhinobatos sp.). The overall north Bornean elasmo assemblage is then compared with other IAA occurrences. An extended fauna list is given based on literature review and preliminary investigation of the Naturalis Biodiversity Centre collection in Leiden (The Netherlands) where most of the fossil fishes of the early explorations are stored. These assemblages are also briefly summarized, and attention is drawn to some of the unique and thus far unreported taxa (e.g., Dalatias licha).
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(This article belongs to the Special Issue Recent Advances in Ecology, Evolution and Biodiversity of the Chondrichthyan Fauna)
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Open AccessArticle
Prediction of Suitable Habitat of Alien Invasive Plant Ambrosia trifida in Northeast China under Various Climatic Scenarios
by
Shengjie Chen, Xuejiao Bai, Ji Ye, Weiwei Chen and Guanghao Xu
Diversity 2024, 16(6), 322; https://doi.org/10.3390/d16060322 - 29 May 2024
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Ambrosia trifida is an invasive alien plant species, which has very high reproductive and environmental adaptability. Through strong resource acquisition ability and allelopathy, it could inhibit the growth and reproduction of surrounding plants and destroy the stability of an invasive ecosystem. It is
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Ambrosia trifida is an invasive alien plant species, which has very high reproductive and environmental adaptability. Through strong resource acquisition ability and allelopathy, it could inhibit the growth and reproduction of surrounding plants and destroy the stability of an invasive ecosystem. It is very important to predict the change of suitable distribution area of A. trifida with climate change before implementing scientific control measures. Based on 106 A. trifida distribution data and 14 points of environmental data, the optimal parameter combination (RM = 0.1, FC = LQ) was obtained using the MaxEnt (version 3.4.1) model optimized by Kuenm package, and thus the potential suitable areas of A. trifida in Northeast China under three different climate scenarios (RCP2.6, RCP4.5, RCP8.5) with different emission intensities in the future (2050, 2070) were predicted. The changes of A. trifida suitable area in Northeast China under three climate scenarios were compared, and the relationship between the change of suitable area and emission intensity was analyzed. In general, the suitable area of A. trifida in Northeast China will expand gradually in the future, and the area of its highly suitable area will also increase with the increasing emission intensity, which is unfavorable to the control of A. trifida.
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Open AccessArticle
Spatio-Temporal Variation in Cyanobacteria and Epiphytic Algae of Thalassia testudinum in Two Localities of Southern Quintana Roo, Mexico
by
Rocio Nava-Olvera, Luz Elena Mateo-Cid, Itzel González-Contreras and Ángela Catalina Mendoza-González
Diversity 2024, 16(6), 321; https://doi.org/10.3390/d16060321 - 28 May 2024
Abstract
The leaves of Thalassia testudinum provide an ideal substrate for the establishment of small-sized algae with different morphologies that are abundant and diverse. There are few studies on epiphytism in Mexico, and most of them are floristic lists. The objective of this study
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The leaves of Thalassia testudinum provide an ideal substrate for the establishment of small-sized algae with different morphologies that are abundant and diverse. There are few studies on epiphytism in Mexico, and most of them are floristic lists. The objective of this study was to analyze the taxonomic and morphofunctional composition of epiphytes in three climatic seasons, and their relationship with the phorophyte T. testudinum in two localities, El Uvero and Santa Rosa, in the south of Quintana Roo; three transects and fifteen quadrants were set in June and December (2014) and April (2015). A total of 84 epiphytic species were identified: 27 corresponded to Cyanobacteria, 10 to Phaeophyceae, 9 to Chlorophyta, and 38 to Rhodophyta. The highest specific richness was observed in Santa Rosa (73 species). The dry and summer rains seasons share a higher number of species compared to the winter rainy season. The crusty algae Hydrolithon farinosum was the dominant and most persistent species; in addition, filamentous algae presented great specific richness and coverage due to their morphology and reproductive strategies, which allowed them to successfully establish themselves on the phorophyte. This is related to the ecological succession of the epiphytes and seagrass phenology.
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(This article belongs to the Section Marine Diversity)
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Species Delimitation of Argonauta Paralarvae Reveals an Extensive Morphological Variability in the Northern Humboldt Current System
by
Ximena Orosco, Patricia Ayón, Giovanna Sotil and Jorge L. Ramirez
Diversity 2024, 16(6), 320; https://doi.org/10.3390/d16060320 - 28 May 2024
Abstract
Argonauts or paper nautiluses are pelagic octopod cephalopods with a cosmopolitan distribution in tropical and subtropical waters around the world. Unlike other species of octopus, these are characterized by the fact that the female has a shell that serves as the breeding chamber
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Argonauts or paper nautiluses are pelagic octopod cephalopods with a cosmopolitan distribution in tropical and subtropical waters around the world. Unlike other species of octopus, these are characterized by the fact that the female has a shell that serves as the breeding chamber for the eggs. Over time, this structure has been used as a taxonomic diagnostic character, causing problems in the systematics of this genus, with around 50 synonymies reported. Only two species, Argonauta argo and A. nouryi, have been reported in the Northern Humboldt Current System; however, there is taxonomic uncertainty regarding these species, which is reflected in the paralarvae (the first stage of life after hatching). In the paralarvae, the chromatophore patterns are considered to be conservative and reliable taxonomic characteristics. The objective of this study is to demonstrate the extensive variability in the chromatophore arrangement of Argonauta paralarvae in the Northern Humboldt Current using DNA barcoding and five species delimitation models. Our results include up to 11 different paralarvae morphotypes according to the pattern of chromatophores (number and arrangement) and 2 shell morphotypes. Species delimitation methods divided the 13 Argonauta morphotypes into two consensus molecular taxonomic units (MOTUs), A. argo and A. nouryi. Additionally, the results revealed an extensive morphological variability in the paralarvae and female shells of A. nouryi, demonstrating the importance of molecular data in studies involving species with different life stages, especially when this extensive morphological variability obscures conventional analyses.
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(This article belongs to the Special Issue Taxonomy, Biology and Evolution of Cephalopods)
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First Documented Courtship Behavior between Mobula birostris and M. alfredi at a Coral Reef Cleaning Station in Misool, Raja Ampat
by
Edy Setyawan, Shawn Heinrichs and Mark Erdmann
Diversity 2024, 16(6), 319; https://doi.org/10.3390/d16060319 - 27 May 2024
Abstract
Though a previous study in Sudan confirmed the existence of a living hybrid of an oceanic manta ray (Mobula birostris) and a reef manta ray (M. alfredi), courtship behaviors between the two closely related species have never been documented.
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Though a previous study in Sudan confirmed the existence of a living hybrid of an oceanic manta ray (Mobula birostris) and a reef manta ray (M. alfredi), courtship behaviors between the two closely related species have never been documented. Here we report the first observation of courtship behaviors between two male M. birostris and a female M. alfredi at a manta ray cleaning station on a shallow coral reef seamount in Misool, Raja Ampat, Indonesia. The observed courtship event lasted for approximately 45 min and involved one male oceanic manta actively chasing the mature reef manta female around the cleaning station and repeatedly bumping her on the left wing tip with his right cephalic lobe, while the second male continuously flanked the female to seemingly prevent her retreat from the cleaning station and potential evasion of the pursuing male. Notably, the female exhibited a rapid coloration change, likely indicative of courtship-related stress, transitioning from the striking pale hue she exhibited throughout the courtship activity to a normal chevron pattern once the males departed.
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(This article belongs to the Collection Interesting Images from the Sea)
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The Diversity and Gradient of Sand-Dune Vegetation at Kasatura Bay: A Plant Biodiversity Hotspot in European Türkiye
by
Dilek Oral, Ali Kavgacı and Asuman Efe
Diversity 2024, 16(6), 318; https://doi.org/10.3390/d16060318 - 27 May 2024
Abstract
The Kasatura Bay region is one of Türkiye’s Important Plant Areas and plant biodiversity hotspots. In this study, the diversity and gradient of the sand-dune vegetation in Kasatura Bay were studied. Vegetation sampling was carried out by using the Braun-Blanquet method. The vegetation
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The Kasatura Bay region is one of Türkiye’s Important Plant Areas and plant biodiversity hotspots. In this study, the diversity and gradient of the sand-dune vegetation in Kasatura Bay were studied. Vegetation sampling was carried out by using the Braun-Blanquet method. The vegetation dataset was recorded in the TURBOVEG database management program. For classification, Beta-Flexible clustering (β = −0.25) and the correlation similarity index were used in the PC-ORD program. Diagnostic species of the communities were determined in the JUICE program using the φ-coefficient (higher than 0.30). Detrended Canonical Correspondence analysis was applied to data in the CANOCO program to understand the effect of ecological factors on vegetation diversity. Ellenberg ecological indicator values were used as the ecological variables. As a result, seven different plant communities were identified at the Kasatura Bay sand dunes. A new association of Sileno thymifoliae–Cionuretum erectae ass. nova was identified under the alliance Sileno thymifoliae–Jurineion kilaeae. The sand-dune vegetation represents high diversity, also including endemic plants, some of which are globally threatened. Due to all this diversity, settled on sensitive conditions, conservation strategies need to be developed to protect and ensure the continuity of Kasatura Bay sand-dune vegetation in the face of intense human pressure.
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(This article belongs to the Section Plant Diversity)
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