Journal Description
Diversity
Diversity
is a peer-reviewed, open access journal on the science of biodiversity from molecules, genes, populations, and species, to ecosystems and is published monthly online by MDPI.
- Open Access— free for readers, with article processing charges (APC) paid by authors or their institutions.
- High Visibility: indexed within Scopus, SCIE (Web of Science), PubAg, GEOBASE, CAPlus / SciFinder, and other databases.
- Journal Rank: JCR - Q2 (Biodiversity Conservation) / CiteScore - Q2 (Agricultural and Biological Sciences (miscellaneous))
- Rapid Publication: manuscripts are peer-reviewed and a first decision is provided to authors approximately 17.8 days after submission; acceptance to publication is undertaken in 2.8 days (median values for papers published in this journal in the second half of 2023).
- Recognition of Reviewers: reviewers who provide timely, thorough peer-review reports receive vouchers entitling them to a discount on the APC of their next publication in any MDPI journal, in appreciation of the work done.
Impact Factor:
2.4 (2022);
5-Year Impact Factor:
2.5 (2022)
Latest Articles
Soil Studies for Fungal Diversity to Enable the Conservation Translocation of Green-Winged Orchid
Diversity 2024, 16(6), 327; https://doi.org/10.3390/d16060327 - 31 May 2024
Abstract
Conservation Translocation (CT), which includes reintroduction, reinforcement and introduction, is gaining momentum, responding to serious population decline in many orchids. Orchid conservation underpinned by a greater emphasis on understanding biotic and abiotic factors of habitats is critical for successful recovery and restoration programmes.
[...] Read more.
Conservation Translocation (CT), which includes reintroduction, reinforcement and introduction, is gaining momentum, responding to serious population decline in many orchids. Orchid conservation underpinned by a greater emphasis on understanding biotic and abiotic factors of habitats is critical for successful recovery and restoration programmes. Anacamptis morio, commonly known as green-winged orchid (GWO), is a terrestrial orchid found throughout Europe, but populations in England rapidly declined in its native range in the last several decades. The current study explored the relationship between soil abiotic characteristics and the community composition of key fungal groups. Wild sites in Essex and Cumbria in England, where successful colonies are currently present, were compared to potential sites for CT in Cumbria. The Cumbrian sites managed by cattle grazing include the wild site and three potential CT sites, with two of them hosting no GWO plants. The Essex site, fOxley Meadow, where no cattle is used for grassland management, hosts the largest population of GWO in England. The aim of this study was to understand whether the community composition of fungi and soil characteristics of the potential CT sites in Cumbria are nearly compatible with that of Oxley Meadow. Oxley Meadow, with around 65,000 plants, stands out as a unique habitat compared to all Cumbria sites, as it showed low organic content. Nitrate and phosphate content were smaller for Oxley Meadow compared to other Cumbrian sites. The proportion of Basidiomycota fungi was greater in Oxley Meadow compared to all Cumbrian sites where Ascomycota dominated. The abundant fungal group found in Oxley Meadow was Agaricales. From Agariclaes, Hygrophoraceae or waxcaps fungi are considered an indicator group of fungi and were the most abundant group in Oxley Meadow. They have a negative correlation with targeted key fungal groups and abiotic parameters. More in-depth assessments using additional primers are essential to better understand the fungal diversity and how this diversity translates to the resilience of orchid habitats. This preliminary study points to future studies to assess whether sites are near-compatible to the wild site where large colonies are present using additional primers collected over different time scales.
Full article
(This article belongs to the Special Issue Diversity in 2024)
►
Show Figures
Open AccessBrief Report
Mapping Breeding Birds in a Karstic Sinkhole with a Comparison between Different Sampling Methods
by
Corrado Battisti, Pierangelo Crucitti, Giuseppe Dodaro, Marco Giardini and Francesca Marini
Diversity 2024, 16(6), 326; https://doi.org/10.3390/d16060326 - 30 May 2024
Abstract
Karstic sinkholes are peculiar structures hosting specific biological communities. Birds are still little studied in this regard. This note reports, for the first time, original data relating to the density of breeding species occurring within a sinkhole in central Italy obtained with a
[...] Read more.
Karstic sinkholes are peculiar structures hosting specific biological communities. Birds are still little studied in this regard. This note reports, for the first time, original data relating to the density of breeding species occurring within a sinkhole in central Italy obtained with a fine-grained and time-expensive sampling technique (mapping method). The results were compared with data sampled with the point counts method carried out in the same phenological period. We recorded 22 breeding species, all typical of meso-thermophilous forests and ecotonal habitats of hilly central Italy. Among them, two species (Turdus merula and Troglodytes troglodytes), typical of shady, undergrowth habitats, were recorded in the deepest part of the sinkhole (−70 m from the top). No significant differences emerged between the relative frequencies of the species obtained with the two methods, except for Luscinia megarhynchos (overestimated with the mapping method) and Aegithalos caudatus (underestimated). At the community level, the comparison of the two methods revealed similar values in univariate diversity metrics, Whittaker plots did not show a significant difference (ANCOVA test), and ordinary least squares regression between the frequencies showed a highly significant correlation. Therefore, in these peculiar habitats, data obtained from the two methods are comparable: since the point counts method needs lower sampling effort, it appeared to be more effective when compared to the mapping method to study these peculiar habitats.
Full article
(This article belongs to the Special Issue 2024 Feature Papers by Diversity’s Editorial Board Members)
►▼
Show Figures
Figure 1
Open AccessArticle
Contributions to the Taxonomy of the Mugilid Genus Moolgarda Whitley (Teleostei: Mugilidae), with Redescriptions of M. crenilabis, M. seheli and M. tade from the Red Sea
by
Sergey V. Bogorodsky, Philipp Thieme, Hiroshi Senou, Zuheir N. Mahmoud, Tilman J. Alpermann and Jean-Dominique Durand
Diversity 2024, 16(6), 325; https://doi.org/10.3390/d16060325 - 30 May 2024
Abstract
The taxonomy of the family Mugilidae has historically posed challenges, marked by discrepancies between described and valid species, compounded by cryptic diversity and a similar external appearance. Previous studies left four of six lineages unidentified within Crenimugil, including Crenimugil sp. A and
[...] Read more.
The taxonomy of the family Mugilidae has historically posed challenges, marked by discrepancies between described and valid species, compounded by cryptic diversity and a similar external appearance. Previous studies left four of six lineages unidentified within Crenimugil, including Crenimugil sp. A and Crenimugil sp. B. The goal of this study is to provide a detailed revision of species assigned to Crenimugil by examining specimens from the Red Sea, which is the type locality of Mugil crenilabis, Mugil seheli and Mugil tade, which were here genetically analyzed. After demonstrating that the genus contains nine monophyletic lineages and Moolgarda pura is a valid nominal species, the mugilid genus Moolgarda is restored. Consequently, Moolgarda has priority over Crenimugil and Valamugil. Additional morphological analyses of specimens from the Red Sea assigned to Moolgarda sp. A and Moolgarda sp. B identified them as representing Moolgarda seheli and Moolgarda crenilabis, respectively. A phylogenetic analysis, including new DNA barcodes, confirmed a wide distribution range of both species in the Indo-West Pacific. The identity of the lineage previously identified as Crenimugil crenilabis remains doubtful, and it is referred to as Moolgarda cf. crenilabis here. A third lineage, previously named Crenimugil buchanani, is re-described as Moolgarda tade, a species originally reported from the Red Sea with a long history of taxonomic confusion. The species is widely distributed in the Indo-West Pacific and distinguished from other congeners by falcate second dorsal and anal fins that are distinctly higher than the first dorsal fin. A detailed description of the Red Sea specimens of M. crenilabis, M. seheli and M. tade is provided, with comments to other unnamed lineages.
Full article
(This article belongs to the Special Issue Fish Diversity in the Red Sea)
►▼
Show Figures
Figure 1
Open AccessArticle
Insect Abundance and Richness Response to Ecological Reclamation on Well Pads 5–12 Years into Succession in a Semi-Arid Natural Gas Field
by
Michael F. Curran, Jasmine Allison, Timothy J. Robinson, Blair L. Robertson, Alexander H. Knudson, Bee M. M. Bott, Steven Bower and Bobby M. Saleh
Diversity 2024, 16(6), 324; https://doi.org/10.3390/d16060324 - 29 May 2024
Abstract
Natural gas extraction is a critical driver of the economy in western North America. Ecological reclamation is important to ensure surface disturbance impacts associated with natural gas development are not permanent and to assist native biota. Previous studies in semi-arid natural gas fields
[...] Read more.
Natural gas extraction is a critical driver of the economy in western North America. Ecological reclamation is important to ensure surface disturbance impacts associated with natural gas development are not permanent and to assist native biota. Previous studies in semi-arid natural gas fields within Sublette County, Wyoming, USA have shown insects respond favorably to 1–3-year-old well pads undergoing reclamation compared to older successional reference vegetation communities dominated by Wyoming big sagebrush (Artemisia tridentata spp. Wyomingensis). Here, we examined well pads which were initially seed 5, 8, 10, 11, and 12 years prior to our study. We used a free, image-based software called SamplePointv. 1.60 to quantify vegetation on these well pads and adjacent reference areas from cell phone camera photographs. Insects were collected with a sweep net and identified to the family and morphospecies level. Statistical analyses were conducted to compare both vegetation and insect communities between reclamation sites and their paired reference area. We found little statistical difference between vegetation communities across our study but found significantly more insect abundance on reclaimed well pads than reference areas in 3 of 5 years and significantly higher family and morphospecies richness on reclaimed well pads in 4 of 5 years. A total of 2036 individual insects representing 270 species from 71 families across 11 orders were identified across this study. A total of 1557 individuals (76.5%) were found on reclamation sites, whereas 479 (23.5%) were found in reference areas across the entire study. A total of 233 species (86.3% of total) were found on reclamation sites, whereas 121 species (44.8% of total) were found in reference areas across the entire study. A total of 67 families (94.4% of total) were found on reclamation sites, whereas 45 families (63.4% of total) were found in reference areas across the entire study. All 11 orders found in the study were found on reclamation sites, whereas 9 orders were found in reference areas across the entire study. Our results suggest reclamation of natural gas well pads within an old successional stand of sagebrush continues to support higher levels of insect biodiversity and abundance for at least 12 years. As insects are the most diverse group of animals on Earth and because they provide a wide array of ecosystem services, our findings suggest ecological reclamation plays an important role in returning biodiversity and ecosystem functionality to a semi-arid and old successional sagebrush–steppe ecosystem.
Full article
(This article belongs to the Special Issue Biodiversity in Arid Ecosystems)
Open AccessReview
The Elasmobranch Fossil Record of the Indo-Australian Archipelago since the Miocene: A Literature Review and New Discoveries from Northern Borneo
by
László Kocsis
Diversity 2024, 16(6), 323; https://doi.org/10.3390/d16060323 - 29 May 2024
Abstract
The Indo-Australian Archipelago (IAA) today exhibits the highest marine biodiversity, which has been evolving since the early Miocene. The existence of this high palaeobiodiversity is attested to by the presence of many fossil invertebrates; however, the region’s fossil fish record is sparse and
[...] Read more.
The Indo-Australian Archipelago (IAA) today exhibits the highest marine biodiversity, which has been evolving since the early Miocene. The existence of this high palaeobiodiversity is attested to by the presence of many fossil invertebrates; however, the region’s fossil fish record is sparse and understudied, which is also the case for cartilaginous fishes. Elasmobranch fossils are dominantly represented by shark and ray teeth in the geological record and can give a quick overview of the composition of the fauna. The first IAA elasmo fossils, shark teeth were described from Java (Indonesia) at the end of the 19th century, and until today, most of the publications are known from this island. In the early and middle of the 20th century, remarkable fossils were also reported from the islands of Madura (NE Java) and Sulawesi, some with detailed taxonomical descriptions. In addition, only sporadic reports on fossil occurrences exist elsewhere from the IAA, but these lack any detailed taxonomic accounts. In 2019 our research group reported a late Miocene elasmobranch fauna from Brunei (Borneo), which is now the most diverse known shallow water fossil assemblage from the entire IAA. This fauna was described from a single fossiliferous outcrop, called Ambug Hill. However, several new localities have been discovered and studied over the years, as a result the number of fossils increased, and their age range extended. Here we provide an overview of these new sites and their elasmobranch fossils, and describe remains from ten taxa among, of which eight are new to the IAA fossil record (Chiloscyllium sp., cf. Hemitriakis sp., Paragaleus sp., Carcharhinus borneensis, C. limbatus, Lamiopsis sp., Scoliodon sp., Rhinobatos sp.). The overall north Bornean elasmo assemblage is then compared with other IAA occurrences. An extended fauna list is given based on literature review and preliminary investigation of the Naturalis Biodiversity Centre collection in Leiden (The Netherlands) where most of the fossil fishes of the early explorations are stored. These assemblages are also briefly summarized, and attention is drawn to some of the unique and thus far unreported taxa (e.g., Dalatias licha).
Full article
(This article belongs to the Special Issue Recent Advances in Ecology, Evolution and Biodiversity of the Chondrichthyan Fauna)
Open AccessArticle
Prediction of Suitable Habitat of Alien Invasive Plant Ambrosia trifida in Northeast China under Various Climatic Scenarios
by
Shengjie Chen, Xuejiao Bai, Ji Ye, Weiwei Chen and Guanghao Xu
Diversity 2024, 16(6), 322; https://doi.org/10.3390/d16060322 - 29 May 2024
Abstract
►▼
Show Figures
Ambrosia trifida is an invasive alien plant species, which has very high reproductive and environmental adaptability. Through strong resource acquisition ability and allelopathy, it could inhibit the growth and reproduction of surrounding plants and destroy the stability of an invasive ecosystem. It is
[...] Read more.
Ambrosia trifida is an invasive alien plant species, which has very high reproductive and environmental adaptability. Through strong resource acquisition ability and allelopathy, it could inhibit the growth and reproduction of surrounding plants and destroy the stability of an invasive ecosystem. It is very important to predict the change of suitable distribution area of A. trifida with climate change before implementing scientific control measures. Based on 106 A. trifida distribution data and 14 points of environmental data, the optimal parameter combination (RM = 0.1, FC = LQ) was obtained using the MaxEnt (version 3.4.1) model optimized by Kuenm package, and thus the potential suitable areas of A. trifida in Northeast China under three different climate scenarios (RCP2.6, RCP4.5, RCP8.5) with different emission intensities in the future (2050, 2070) were predicted. The changes of A. trifida suitable area in Northeast China under three climate scenarios were compared, and the relationship between the change of suitable area and emission intensity was analyzed. In general, the suitable area of A. trifida in Northeast China will expand gradually in the future, and the area of its highly suitable area will also increase with the increasing emission intensity, which is unfavorable to the control of A. trifida.
Full article
Figure 1
Open AccessArticle
Spatio-Temporal Variation in Cyanobacteria and Epiphytic Algae of Thalassia testudinum in Two Localities of Southern Quintana Roo, Mexico
by
Rocio Nava-Olvera, Luz Elena Mateo-Cid, Itzel González-Contreras and Ángela Catalina Mendoza-González
Diversity 2024, 16(6), 321; https://doi.org/10.3390/d16060321 - 28 May 2024
Abstract
The leaves of Thalassia testudinum provide an ideal substrate for the establishment of small-sized algae with different morphologies that are abundant and diverse. There are few studies on epiphytism in Mexico, and most of them are floristic lists. The objective of this study
[...] Read more.
The leaves of Thalassia testudinum provide an ideal substrate for the establishment of small-sized algae with different morphologies that are abundant and diverse. There are few studies on epiphytism in Mexico, and most of them are floristic lists. The objective of this study was to analyze the taxonomic and morphofunctional composition of epiphytes in three climatic seasons, and their relationship with the phorophyte T. testudinum in two localities, El Uvero and Santa Rosa, in the south of Quintana Roo; three transects and fifteen quadrants were set in June and December (2014) and April (2015). A total of 84 epiphytic species were identified: 27 corresponded to Cyanobacteria, 10 to Phaeophyceae, 9 to Chlorophyta, and 38 to Rhodophyta. The highest specific richness was observed in Santa Rosa (73 species). The dry and summer rains seasons share a higher number of species compared to the winter rainy season. The crusty algae Hydrolithon farinosum was the dominant and most persistent species; in addition, filamentous algae presented great specific richness and coverage due to their morphology and reproductive strategies, which allowed them to successfully establish themselves on the phorophyte. This is related to the ecological succession of the epiphytes and seagrass phenology.
Full article
(This article belongs to the Section Marine Diversity)
►▼
Show Figures
Figure 1
Open AccessArticle
Species Delimitation of Argonauta Paralarvae Reveals an Extensive Morphological Variability in the Northern Humboldt Current System
by
Ximena Orosco, Patricia Ayón, Giovanna Sotil and Jorge L. Ramirez
Diversity 2024, 16(6), 320; https://doi.org/10.3390/d16060320 - 28 May 2024
Abstract
Argonauts or paper nautiluses are pelagic octopod cephalopods with a cosmopolitan distribution in tropical and subtropical waters around the world. Unlike other species of octopus, these are characterized by the fact that the female has a shell that serves as the breeding chamber
[...] Read more.
Argonauts or paper nautiluses are pelagic octopod cephalopods with a cosmopolitan distribution in tropical and subtropical waters around the world. Unlike other species of octopus, these are characterized by the fact that the female has a shell that serves as the breeding chamber for the eggs. Over time, this structure has been used as a taxonomic diagnostic character, causing problems in the systematics of this genus, with around 50 synonymies reported. Only two species, Argonauta argo and A. nouryi, have been reported in the Northern Humboldt Current System; however, there is taxonomic uncertainty regarding these species, which is reflected in the paralarvae (the first stage of life after hatching). In the paralarvae, the chromatophore patterns are considered to be conservative and reliable taxonomic characteristics. The objective of this study is to demonstrate the extensive variability in the chromatophore arrangement of Argonauta paralarvae in the Northern Humboldt Current using DNA barcoding and five species delimitation models. Our results include up to 11 different paralarvae morphotypes according to the pattern of chromatophores (number and arrangement) and 2 shell morphotypes. Species delimitation methods divided the 13 Argonauta morphotypes into two consensus molecular taxonomic units (MOTUs), A. argo and A. nouryi. Additionally, the results revealed an extensive morphological variability in the paralarvae and female shells of A. nouryi, demonstrating the importance of molecular data in studies involving species with different life stages, especially when this extensive morphological variability obscures conventional analyses.
Full article
(This article belongs to the Special Issue Taxonomy, Biology and Evolution of Cephalopods)
►▼
Show Figures
Figure 1
Open AccessInteresting Images
First Documented Courtship Behavior between Mobula birostris and M. alfredi at a Coral Reef Cleaning Station in Misool, Raja Ampat
by
Edy Setyawan, Shawn Heinrichs and Mark Erdmann
Diversity 2024, 16(6), 319; https://doi.org/10.3390/d16060319 - 27 May 2024
Abstract
Though a previous study in Sudan confirmed the existence of a living hybrid of an oceanic manta ray (Mobula birostris) and a reef manta ray (M. alfredi), courtship behaviors between the two closely related species have never been documented.
[...] Read more.
Though a previous study in Sudan confirmed the existence of a living hybrid of an oceanic manta ray (Mobula birostris) and a reef manta ray (M. alfredi), courtship behaviors between the two closely related species have never been documented. Here we report the first observation of courtship behaviors between two male M. birostris and a female M. alfredi at a manta ray cleaning station on a shallow coral reef seamount in Misool, Raja Ampat, Indonesia. The observed courtship event lasted for approximately 45 min and involved one male oceanic manta actively chasing the mature reef manta female around the cleaning station and repeatedly bumping her on the left wing tip with his right cephalic lobe, while the second male continuously flanked the female to seemingly prevent her retreat from the cleaning station and potential evasion of the pursuing male. Notably, the female exhibited a rapid coloration change, likely indicative of courtship-related stress, transitioning from the striking pale hue she exhibited throughout the courtship activity to a normal chevron pattern once the males departed.
Full article
(This article belongs to the Collection Interesting Images from the Sea)
►▼
Show Figures
Figure 1
Open AccessArticle
The Diversity and Gradient of Sand-Dune Vegetation at Kasatura Bay: A Plant Biodiversity Hotspot in European Türkiye
by
Dilek Oral, Ali Kavgacı and Asuman Efe
Diversity 2024, 16(6), 318; https://doi.org/10.3390/d16060318 - 27 May 2024
Abstract
The Kasatura Bay region is one of Türkiye’s Important Plant Areas and plant biodiversity hotspots. In this study, the diversity and gradient of the sand-dune vegetation in Kasatura Bay were studied. Vegetation sampling was carried out by using the Braun-Blanquet method. The vegetation
[...] Read more.
The Kasatura Bay region is one of Türkiye’s Important Plant Areas and plant biodiversity hotspots. In this study, the diversity and gradient of the sand-dune vegetation in Kasatura Bay were studied. Vegetation sampling was carried out by using the Braun-Blanquet method. The vegetation dataset was recorded in the TURBOVEG database management program. For classification, Beta-Flexible clustering (β = −0.25) and the correlation similarity index were used in the PC-ORD program. Diagnostic species of the communities were determined in the JUICE program using the φ-coefficient (higher than 0.30). Detrended Canonical Correspondence analysis was applied to data in the CANOCO program to understand the effect of ecological factors on vegetation diversity. Ellenberg ecological indicator values were used as the ecological variables. As a result, seven different plant communities were identified at the Kasatura Bay sand dunes. A new association of Sileno thymifoliae–Cionuretum erectae ass. nova was identified under the alliance Sileno thymifoliae–Jurineion kilaeae. The sand-dune vegetation represents high diversity, also including endemic plants, some of which are globally threatened. Due to all this diversity, settled on sensitive conditions, conservation strategies need to be developed to protect and ensure the continuity of Kasatura Bay sand-dune vegetation in the face of intense human pressure.
Full article
(This article belongs to the Section Plant Diversity)
►▼
Show Figures
Figure 1
Open AccessArticle
Invasive Plant Species Demonstrate Enhanced Resource Acquisition Traits Relative to Native Non-Dominant Species but not Compared with Native Dominant Species
by
Yingcan Chen, Yijie Xie, Caihong Wei, Si Liu, Xiaoyue Liang, Jiaen Zhang and Ronghua Li
Diversity 2024, 16(6), 317; https://doi.org/10.3390/d16060317 - 26 May 2024
Abstract
Invasive plant species are often characterized by superior resource acquisition capabilities compared with native species, contributing to their success in new environments. However, the dominance of these species varies, and not all invasive species become dominant, nor are all native species uniformly vulnerable
[...] Read more.
Invasive plant species are often characterized by superior resource acquisition capabilities compared with native species, contributing to their success in new environments. However, the dominance of these species varies, and not all invasive species become dominant, nor are all native species uniformly vulnerable to competitive exclusion. In this study, we analyzed 19 functional traits across 144 herbaceous plant species in Guangzhou, China. The studied species included 31 invasive dominant species (IDS), 19 invasive non-dominant species (INS), 63 native dominant species (NDS), and 31 native non-dominant species (NNS). Our findings reveal no significant differences in functional traits between IDS and INS, indicating a broad trait similarity within invasive categories. Pronounced similarities between invasive species and NDS suggest an ecological equivalency that facilitates successful integration and competition in new habitats. Notable differences in several key traits—height, leaf thickness, leaf water content, stoichiometry, photosynthetic rate, water use efficiency, and nitrogen use efficiency—indicate a competitive superiority in resource acquisition and utilization for invasive species over NNS. These distinctions are vital for understanding the mechanisms driving the success of invasive species and are crucial for developing strategies to manage their impact on native ecosystems.
Full article
(This article belongs to the Topic Plant Invasion)
►▼
Show Figures
Figure 1
Open AccessArticle
Habitat Fragmentation Enhances the Difference between Natural and Artificial Reefs in an Urban Marine Coastal Tract
by
Ilaria Mancini, Annalisa Azzola, Carlo Nike Bianchi, Marco Capello, Laura Cutroneo, Carla Morri, Alice Oprandi and Monica Montefalcone
Diversity 2024, 16(6), 316; https://doi.org/10.3390/d16060316 - 25 May 2024
Abstract
Coastal urbanization and the consequent proliferation of artificial structures greatly impact rocky reef communities, productive and diverse marine environments that play a crucial role in the functioning of broader coastal ecosystems. This study, conducted along a 7 km stretch of coastline at increasing
[...] Read more.
Coastal urbanization and the consequent proliferation of artificial structures greatly impact rocky reef communities, productive and diverse marine environments that play a crucial role in the functioning of broader coastal ecosystems. This study, conducted along a 7 km stretch of coastline at increasing distance from the port of Genoa (Ligurian Sea), investigated whether the alternating presence of artificial and natural reefs leads to discernible differences in the biota inhabiting these two reef types. The study area is one of the most anthropized areas of the Mediterranean Sea, exhibiting nearly 60% coastal artificialization, which severely impacts coastal ecosystems, favouring the replacement of sensitive species with more tolerant species. Ten reefs (5 natural and 5 artificial) were surveyed by scuba diving at about a 6-m depth, employing quadrats of 50 cm × 50 cm to estimate visually the percent cover of conspicuous sessile organisms. The artificial reefs hosted a similar number of species (18) to their natural counterparts (19) but exhibited a distinct community composition: the former were especially characterized by Jania rubens and filamentous algae, with the latter characterized by Peyssonnelia squamaria and Mesophyllum lichenoides. This difference, however, became negligible where coastal habitat fragmentation (here measured with a purposely devised Fragmentation Index) was minimal. Reducing fragmentation may therefore represent a management strategy to minimize the potential impact of artificial structures on marine biodiversity.
Full article
(This article belongs to the Special Issue The Ligurian Sea and the National Biodiversity Future Centre (NBFC): Biodiversity Conservation in a Temperate Marine Environment under Threat)
Open AccessArticle
Spatio-Temporal Dynamics of Larval Fish Assemblage in the Nakdong River Estuary, South Korea
by
Hee-Chan Choi, Seok-Hyun Youn, Sasngil Kim and Joo Myun Park
Diversity 2024, 16(6), 315; https://doi.org/10.3390/d16060315 - 24 May 2024
Abstract
Estuaries are crucial fish nursery habitats owing to their high productivity and the presence of various microhabitats for the early development of aquatic organisms. This study investigated the temporal and spatial patterns of the species composition and abundance of larval fish assemblages in
[...] Read more.
Estuaries are crucial fish nursery habitats owing to their high productivity and the presence of various microhabitats for the early development of aquatic organisms. This study investigated the temporal and spatial patterns of the species composition and abundance of larval fish assemblages in the Nakdong River estuary, South Korea, through bi-monthly sampling in the inner and outer estuaries. Fifty-five larval taxa were collected, and the larval fish assemblages were dominated by a few species. Engraulis japonicus (28.8%) was the most abundant, followed by Gobiidae sp.1 (22.6%), Clupea pallasii (13.9%), and Omobranchus sp. (6.1%). The species richness, abundance, and diversity tended to be higher during the warm season in the inner estuary. Multivariate analyses revealed that the structures of larval fish assemblages were significantly influenced by the season and site. Spatial and seasonal changes in larval fish assemblages resulted from the different occurrence patterns of common fish larvae in relation to water temperature and salinity. Among the predominant fish larvae, E. japonicus was captured more frequently in more saline outer estuaries during the warm season, whereas Gobiidae sp.1 and C. pallasii were more abundant in less saline inner estuaries during the warm and cold seasons, respectively. The results of this study improve our understanding of larval biodiversity in estuarine habitats in relation to environmental modification and contribute to the evaluation of nursery functions in the Nakdong River estuary.
Full article
(This article belongs to the Special Issue Dynamics of Marine Communities)
Open AccessArticle
Survival, Nest Site Affiliation and Post-Fledging Movements of Danish White-Tailed Eagles (Haliaeetus albicilla)
by
Daniel Palm Eskildsen, Nina Yasmin Ali, Jonas Colling Larsen, Kasper Thorup, Kim Skelmose and Anders P. Tøttrup
Diversity 2024, 16(6), 314; https://doi.org/10.3390/d16060314 - 23 May 2024
Abstract
The early life movement patterns of long-lived, large raptors, such as the white-tailed eagle (Haliaeetus albicilla), remain largely unexplored. In this study, we have tracked 22 individuals of white-tailed eagles hatched in Denmark to investigate key parameters, including survival rates, causes
[...] Read more.
The early life movement patterns of long-lived, large raptors, such as the white-tailed eagle (Haliaeetus albicilla), remain largely unexplored. In this study, we have tracked 22 individuals of white-tailed eagles hatched in Denmark to investigate key parameters, including survival rates, causes of death, nest site fidelity, geographical distribution, and dispersal behaviors. Our analyses are based on approximately 340,000 GPS/GSM telemetry positions from the 22 individuals. We found that survival rates were lower in the first year of life, especially among females, but increased in subsequent years. The primary causes of death were wind turbine collisions and avian influenza. Movement analyses revealed that juvenile eagles frequented nest sites in August and September, with females showing earlier exploratory flights and dispersal. Both males and females spent most of their first calendar year near their nest sites. In the second calendar year, a significant proportion of their time was spent at well-known white-tailed eagle resting areas in Denmark, as well as visiting neighboring countries. Notably, one individual set a new distance record for a Danish GPS-tagged white-tailed eagle, venturing at least 1750 km away from its nest site to visit Sweden, Finland, Russia, and Norway. Our results, indicating that juvenile white-tailed eagles continue to utilize nest sites into September, suggest an extension of the recommended time period for nest protection zones provided by BirdLife Denmark (DOF).
Full article
(This article belongs to the Special Issue Ecology and Conservation of the White-Tailed Eagle and Golden Eagle)
►▼
Show Figures
Figure 1
Open AccessArticle
Genetic Diversity and Relationships among Indian Jujube (Ziziphus mauritiana Lamk.) Cultivars Using Morphometric Characteristics, matK Barcoding, and ISSR Markers
by
Mahmoud Abdel-Sattar, Rashid S. Al-Obeed, Hail Z. Rihan and Ghada E. El-Badan
Diversity 2024, 16(6), 313; https://doi.org/10.3390/d16060313 - 23 May 2024
Abstract
►▼
Show Figures
Indian jujube displays genetic diversity and does not prominently display minute morphometric variations, and this makes correct identification a difficult and long-term task. However, little work has been conducted to bring jujube cultivars into domestication. So, the present study aimed to evaluate eleven
[...] Read more.
Indian jujube displays genetic diversity and does not prominently display minute morphometric variations, and this makes correct identification a difficult and long-term task. However, little work has been conducted to bring jujube cultivars into domestication. So, the present study aimed to evaluate eleven cultivars of Indian jujube in terms of the fruit’s morphometric characteristics, as well as molecular marker studies by plastidial megakaryocyte-associated tyrosine kinase (matK) barcoding and inter-simple sequence repeats (ISSR) markers for species differentiation, identification, and relationships among Indian jujube cultivars. The results of the morphometric characteristics showed that the mean geometric diameter, surface area, sphericity, sphericity ratio, shape index, fruit length, fruit diameter, fruit weight, and seed weight varied among cultivars. The results also showed that the color values of L*, a*, and b* for fruits differed in different cultivars. In addition, the results showed a discrepancy in the genetic diversity parameters related to the matK barcoding, ISSR markers, and relationships among Indian jujube cultivars. Substantially, hierarchical clustering by heatmap revealed that ‘Zytoni’ and ‘Um-Sulaem’ with spines seem to be mono-clades distinct from other cultivars, which related to variations in the expression levels of genes. Therefore, they should be relied upon together to distinguish and identify cultivars in order to maximize the effectiveness of local germplasm conservation and exploitation.
Full article
Figure 1
Open AccessArticle
The Role of Experience in the Visual and Non-Visual Prey Recognition of Fire Salamander Populations from Caves and Streams
by
Hayes Hoover, Raoul Manenti and Andrea Melotto
Diversity 2024, 16(6), 312; https://doi.org/10.3390/d16060312 - 22 May 2024
Abstract
The study of foraging behaviour is crucial for understanding several ecological and adaptive processes, as well as for developing conservation measures. While extensive research has been completed on birds and mammals, few studies have been conducted on the learning capabilities of amphibians, particularly
[...] Read more.
The study of foraging behaviour is crucial for understanding several ecological and adaptive processes, as well as for developing conservation measures. While extensive research has been completed on birds and mammals, few studies have been conducted on the learning capabilities of amphibians, particularly those pertaining to foraging behaviour. Amphibians may detect potential prey through distinct sensory systems including visual detection, chemoreception, and mechanoreception. In this study, we tested whether fire salamander larvae shift their prey recognition depending on the prey stimulus typology. We performed behavioural assays to better understand the roles of visual and chemical cues in prey recognition and how a continuative visual stimulus may change behavioural patterns. For this assessment, larvae from different habitats (cave and stream) were reared under laboratory conditions and fed while exposed to accompanying sensory stimuli. Their responses to visual and olfactory cues were measured before and after rearing. Both visual and chemical cues significantly affected the time of approach to the stimulus. The period of rearing significantly interacted with the time of approach for both cues. After rearing, when visual cues occurred, the time of approach was much lower than before rearing. These findings provide a basis for further studies on the role of plasticity in the predator–prey interactions of fire salamander larvae.
Full article
(This article belongs to the Special Issue 2024 Feature Papers by Diversity’s Editorial Board Members)
►▼
Show Figures
Figure 1
Open AccessArticle
Changes in Freeze-Thaw Environments in a Cold Lake: Eliciting New Insights into the Activity and Composition of Bacterial Communities
by
Chen Feng, Junping Lu, Yongqin Jia, Zhiqiang Tian, Zixuan Zhang, Yaxin Hu and Yinghui Liu
Diversity 2024, 16(6), 311; https://doi.org/10.3390/d16060311 - 22 May 2024
Abstract
►▼
Show Figures
This study explored the dynamics of bacterial community composition, response to environmental factors, and co-occurrence network models across different habitats of Wuliangsuhai Lake during the glacial period. Water quality analysis and high-throughput sequencing were performed at 14 monitoring sites within the lake. Additionally,
[...] Read more.
This study explored the dynamics of bacterial community composition, response to environmental factors, and co-occurrence network models across different habitats of Wuliangsuhai Lake during the glacial period. Water quality analysis and high-throughput sequencing were performed at 14 monitoring sites within the lake. Additionally, a co-occurrence network between the two bacterial operational taxonomic unit (OTU)-OTUs was established. The results indicated significant differences in water quality indices, namely total nitrogen (TN), chemical oxygen demand (COD), total dissolved solids (TDS), salinity (SAL), chlorophyll-a (Chl.a), and electrical conductivity (EC), between the ice bodies of Wuliangsuhai Lake and subglacial water. Although there were no significant differences in α diversity across various media, substantial differences were observed in β diversity. The VIF and RDA analyses revealed that lake water quality factors significantly affected the microbial community structure and COD and TDS had the highest explanation for the community composition change. Network analysis demonstrated that competition dominated the bacterial community in water bodies with higher complexity and stability and ice body bacteria exhibited more reciprocal relationships and weaker resistance to external environmental disturbances. The co-occurrence network demonstrated a modular structure in the external environment, with g_Flavobacterium, f_Arcobacteraceae, and g_Sphingobacteriaceae being the main keystone species. Investigating the habitat heterogeneity of lake bacterial communities and identifying major groups and key species using molecular ecological network models and their topological effects can provide a theoretical foundation for monitoring and assessing the structural stability of lake ecosystems in cold regions.
Full article
Figure 1
Open AccessArticle
Determinants of Butterfly Community Structure and Composition at the Local Habitat Level: Importance of Neighboring Vegetation and Management Status: A Case Study
by
Masahiko Kitahara and Taisuke Yasuda
Diversity 2024, 16(6), 310; https://doi.org/10.3390/d16060310 - 21 May 2024
Abstract
Exploring the determinants of biological community structure is important not only for understanding the formation of the community, but also for promoting its biodiversity conservation. We monitored butterfly communities in a grassland and woodland area of Mount Fuji, Japan, and explored the environmental
[...] Read more.
Exploring the determinants of biological community structure is important not only for understanding the formation of the community, but also for promoting its biodiversity conservation. We monitored butterfly communities in a grassland and woodland area of Mount Fuji, Japan, and explored the environmental factors that influenced them. Multivariate regression tree (MRT) analysis generated a 3-leaved MRT (G1, G2, and G3) and showed the total explained variation of 64.4% in the species composition. The explanatory variables discriminating between the two branches in the first node and in the second node of the MRT were neighboring plant community and management status, respectively. The neighboring plant community was related to the distribution of butterfly dietary resources and contributed a lot in determining the species composition of the community while the management status was largely related to the amount of their dietary resources, affecting the species richness and diversity. The PCA results revealed that the three key groups (G1, G2, and G3) were formed along the gradients of these two factors. Consequently, maintaining mowing management and the diversity of neighboring vegetation is very important for the continuance of butterfly community diversity and composition and the conservation of Red Listed species in the area.
Full article
(This article belongs to the Special Issue Biodiversity, Ecology and Conservation of Lepidoptera)
►▼
Show Figures
Figure 1
Open AccessArticle
Elucidating the Disrupted Seasonal Cycle of Eodiaptomus japonicus (Calanoida, Copepoda) in Lake Biwa: Insights from an Individual-Based Model
by
Amane Takahashi, Syuhei Ban, Xin Liu, Sami Souissi, Tomohiro Oda and Gaël Dur
Diversity 2024, 16(6), 309; https://doi.org/10.3390/d16060309 - 21 May 2024
Abstract
The seasonal fluctuations of the copepod Eodiaptomus japonicus, which dominates the zooplankton community of Lake Biwa, have been disrupted several times over the past 45 years. The aim of this study was to clarify the primary environmental factor that caused the disrupted
[...] Read more.
The seasonal fluctuations of the copepod Eodiaptomus japonicus, which dominates the zooplankton community of Lake Biwa, have been disrupted several times over the past 45 years. The aim of this study was to clarify the primary environmental factor that caused the disrupted seasonal cycle in population density of E. japonicus. Here, we tested the hypothesis that the disruption in their seasonal cycle was due to the impacts of water temperature, food conditions, and predator pressure, using an individual-based model (IBM). Based on the experimental data from the literature, we described the growth and reproduction of E. japonicus using temperature- and food-dependent functions. Previously, the developmental time of this species was expressed using Bělehrádek’s equation. In this study, we applied the Kontodimas equation, which successfully reproduced the effects of food scarcity at higher temperatures. Additionally, the influence of predators was incorporated into the survival rate of adult individuals. The long-term data set of Lake Biwa was input into the developed model to simulate the population fluctuations during the disruption period (1975–1979) and stable period (1995–1999) of their seasonal cycle. The combination of environmental data to be input was (1) water temperature, food availability, and predators; (2) water temperature and food availability; and (3) water temperature and predators. Disruptions in the seasonal cycle of the population were only observed in scenario (1) during the disruption period simulation, suggesting that the disrupted seasonal cycle of this species in Lake Biwa may have been caused by the effects of both food condition and predators. The results of simulation scenarios (2) and (3) indicated that predators have a stronger impact on the population than food availability. This time, we used common and simple indicators to describe food conditions and predators, but the model can be improved to be more complex and accurate as more data become available. Such models are important tools for understanding the relationship between environmental factors and the dynamics of diaptomid copepod populations.
Full article
(This article belongs to the Special Issue Diversity, Ecology and Conservation of Zooplankton)
►▼
Show Figures
Graphical abstract
Open AccessReview
The City as an Evolutionary Hothouse—The Search for Rapid Evolution in Urban Settings
by
Gad Perry and Thomas Göttert
Diversity 2024, 16(6), 308; https://doi.org/10.3390/d16060308 - 21 May 2024
Abstract
Cities are ubiquitous and, though a novel phenomenon by evolutionary standards, provide a home for many species and exert particularly strong and novel selection pressures on them. They thus offer a unique opportunity to study rapid evolutionary processes. We conducted a scoping review
[...] Read more.
Cities are ubiquitous and, though a novel phenomenon by evolutionary standards, provide a home for many species and exert particularly strong and novel selection pressures on them. They thus offer a unique opportunity to study rapid evolutionary processes. We conducted a scoping review of published studies documenting evolutionary processes in urban environments, focusing primarily on more recent work. Unfortunately, cities have not been attractive environments for biological research and thus remain poorly studied, despite slowly growing interest in recent years. Nonetheless, we found studies documenting the effects of mutation, genetic drift, and selection in cities. However, studies show some geographic bias and were not always as conclusive as might be desired. There is even support for incipient urban speciation. Evidence across the board is less abundant and less conclusive than desirable, suggesting the need for more data collection. The urban setting, with its stronger selection, more common intermixing, and abundance of both human and widespread potential non-human zoonosis hosts and human-associated species offers great opportunities to further document evolution in action and explore its conservation implications.
Full article
(This article belongs to the Special Issue Diversity in 2024)
►▼
Show Figures
Figure 1
Journal Menu
► ▼ Journal Menu-
- Diversity Home
- Aims & Scope
- Editorial Board
- Reviewer Board
- Topical Advisory Panel
- Instructions for Authors
- Special Issues
- Topics
- Sections & Collections
- Article Processing Charge
- Indexing & Archiving
- Editor’s Choice Articles
- Most Cited & Viewed
- Journal Statistics
- Journal History
- Journal Awards
- Conferences
- Editorial Office
Journal Browser
► ▼ Journal BrowserHighly Accessed Articles
Latest Books
E-Mail Alert
News
Topics
Topic in
Agronomy, Diversity, Forests, IJPB, Plants
Plant Invasion
Topic Editors: Bruce Osborne, Panayiotis G. DimitrakopoulosDeadline: 31 July 2024
Topic in
Diversity, Ecologies, JMSE, Sustainability, Water
Marine Ecology, Environmental Stress and Management
Topic Editors: Michael Karydis, Maurizio AzzaroDeadline: 30 August 2024
Topic in
Diversity, Life, Microorganisms, Plants, Water, Phycology, Toxins
Advances and New Insights into Diversity of Cyanobacteria
Topic Editors: Esther Berrendero Gómez, M. Ángeles Muñoz Martín, Elvira Perona UrízarDeadline: 31 October 2024
Topic in
Diversity, Forests, Land, Plants, Sustainability
Nature-Based Solutions-2nd Edition
Topic Editors: Panayiotis G. Dimitrakopoulos, Miklas Scholz, Mario A. Pagnotta, Arshiya NooraniDeadline: 15 December 2024
Conferences
Special Issues
Special Issue in
Diversity
Recent Advances in Ecology, Evolution and Biodiversity of the Chondrichthyan Fauna
Guest Editor: Simon WeigmannDeadline: 31 May 2024
Special Issue in
Diversity
Ecology and Conservation of Marine Megafauna
Guest Editor: José Carlos BáezDeadline: 20 June 2024
Special Issue in
Diversity
Wildlife in Natural and Altered Environments
Guest Editor: Francisco Javier Zamora-CamachoDeadline: 30 June 2024
Special Issue in
Diversity
Diversity and Ecological Roles of Actinomycetes
Guest Editor: Ipek KurtbokeDeadline: 15 July 2024
Topical Collections
Topical Collection in
Diversity
Feature Papers in Biogeography and Macroecology
Collection Editor: Michel Baguette
Topical Collection in
Diversity
Feature Papers in Phylogeny and Evolution
Collection Editor: Eric Buffetaut
Topical Collection in
Diversity
Collection of Experts’ Researches on Aquatic Life (CEREAL)
Collection Editors: Wonchoel Lee, Bum Soo Park, Jae-Ho Jung
Topical Collection in
Diversity
Marine Invasive Species
Collection Editors: Bert W. Hoeksema, Adriaan Gittenberger